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We announce here the first complete chloroplast genome sequence of Lagerstroemia balansae, a plant species with extremely small populations rated the level of EN (Endangered) in China. This complete chloroplast genome is 152316 bp in size. In total, 130 genes were identified, including 85 protein-coding genes, 37 tRNA genes, 8 rRNA genes. The result of phylogenetic analysis strongly supported that L. balansae was closely related to L. tomentosa.The complete mitochondrial genome of Cercopithecus neglectus was described. The mitogenome is
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