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With the expansion of the aquatic market and the large quantity of seafood consumption, the issues on safety, traceability and authenticity of seafood are becoming more and more important. Herein, a mass spectrometric method by direct analysis of fish samples was developed for fish authentication. A high-throughput matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI TOF MS) technique was applied to analyze the substances on the fish skin, or the surface molecularly imprinted substances on the surface of m